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Transposons played a major role in the diversification between the closely related almond and peach genomes: results from the almond genome sequence

Publicated to:Plant Journal. 101 (2): 455-472 - 2020-01-01 101(2), doi: 10.1111/tpj.14538

Affiliations

10 ;‎ Ctr Genom Regulat CRG, Bioinformat & Genom Programme, Dr Aiguader 88, Barcelona 08003, Spain - Author

11 ;‎ Pirbright Inst, Woking GU24 0NF, Surrey, England - Author

12 ;‎ Gobierno de Aragon, Ctr Invest & Tecnol Agroalimentaria Aragon CITA, Unidad Hortofruticultura, Avda Montanana 930, Zaragoza 50059, Spain - Author

13 ;‎ Univ Zaragoza, IA2, CITA, Calle Miguel Servet 177, E-50013 Zaragoza, Spain - Author

14 ;‎ Univ Adelaide, Sch Agr Food & Wine, Waite Res Inst, PMB 1, Glen Osmond, SA 5064, Australia - Author

15 ;‎ ICREA, Pg Lluis Companys 23, Barcelona 08010, Spain - Author

2 ;‎ Univ Pompeu Fabra, Barcelona 08005, Spain - Author

3 ;‎ IRTA, Campus UAB,Edifici Crag, Barcelona 08193, Spain - Author

4 ;‎ CSIC IRTA UAB UB, CRAG, Campus UAB,Edifici CRAG, Barcelona 08193, Spain - Author

5 ;‎ Washington State Univ, Dept Hort, Pullman, WA 99164 USA - Author

6 ;‎ INRA, Unite Genet & Arneliorat Fruits & Legumes GAFL, UR1052, Domaine St Maurice CS 60094, F-84143 Montfavet, France - Author

7 ;‎ Univ Calif Berkeley, Dept Environm Sci Policy & Management, Berkeley, CA 94720 USA - Author

8 ;‎ IGI, Berkeley, CA 94720 USA - Author

9 ;‎ CSIC, Ctr Biol Res CIB CSIC, Dept Environm Biol, Ramiro de Maeztu 9, Madrid 28040, Spain - Author

1 ;‎ BIST, Ctr Genom Regulat CRG, CNAG CRG, Baldiri & Reixac 4, Barcelona 08028, Spain - Author

BIST, Ctr Genom Regulat CRG, CNAG CRG, Baldiri & Reixac 4, Barcelona 08028, Spain - Author

CERCA Programme-Generalitat de Catalunya - Funding

CSIC IRTA UAB UB, CRAG, Campus UAB,Edifici CRAG, Barcelona 08193, Spain - Author

CSIC, Ctr Biol Res CIB CSIC, Dept Environm Biol, Ramiro de Maeztu 9, Madrid 28040, Spain - Author

Ctr Genom Regulat CRG, Bioinformat & Genom Programme, Dr Aiguader 88, Barcelona 08003, Spain - Author

Genòmica i Biotecnologia . Producció Vegetal - Author

Gobierno de Aragon, Ctr Invest & Tecnol Agroalimentaria Aragon CITA, Unidad Hortofruticultura, Avda Montanana 930, Zaragoza 50059, Spain - Author

ICREA, Pg Lluis Companys 23, Barcelona 08010, Spain - Author

IGI, Berkeley, CA 94720 USA - Author

INRA, Unite Genet & Arneliorat Fruits & Legumes GAFL, UR1052, Domaine St Maurice CS 60094, F-84143 Montfavet, France - Author

Instituto de Investigacion Agropecuaria (INIA) Appeared in article as Spanish Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria (INIA) - Funding

IRTA, Campus UAB,Edifici Crag, Barcelona 08193, Spain - Author

Pirbright Inst, Woking GU24 0NF, Surrey, England - Author

Severo Ochoa Program for Centres of Excellence in RD - Funding

Severo Ochoa Program for Centres of Excellence in RD [201-2019 SEV-2015-0533] - Funding

Spanish Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria (INIA)Instituto de Investigacion Agropecuaria (INIA) [RTA-2014-00062] - Funding

Spanish Ministry of Economy and Competitiveness (MINECO/FEDER) - Funding

Spanish Ministry of Economy and Competitiveness (MINECO/FEDER) [AGL2012-40228-C02-01, AGL2015-68329-R, AGL2016-78992-R, RTA2015-00050-00-00] - Funding

Univ Adelaide, Sch Agr Food & Wine, Waite Res Inst, PMB 1, Glen Osmond, SA 5064, Australia - Author

Univ Calif Berkeley, Dept Environm Sci Policy & Management, Berkeley, CA 94720 USA - Author

Univ Pompeu Fabra, Barcelona 08005, Spain - Author

Univ Zaragoza, IA2, CITA, Calle Miguel Servet 177, E-50013 Zaragoza, Spain - Author

Waite Research Institute of the University of Adelaide - Funding

Washington State Univ, Dept Hort, Pullman, WA 99164 USA - Author

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Abstract

Keywords: prunus dulcis ; prunus persica ; prunus dulcis ; prunus persica ; crop evolution; divergence; genome sequence; indels; seed bitterness; transposable elements; Annotation; Crop evolution; Database; Divergence; Evolution; Genes; Genome sequence; Indels; Integration; Multiple alignment; Origin; Prunus dulcis; Prunus persica; Reconstruction; Rna; Rosaceae; Seed bitterness; Transposable elements; Variability

Quality index

	WoS				Scopus by Scimago
Best Categ.	Plant Sciences				Plant Science
	WoS	Scopus by Scimago	SPI	Fecyt	Agaur	Dialnet	Circ	Capes	Miar
IF	6.486	3.058	-			-			11.000
Rank	15/234	16/516
Q	Q1	Q1	-	-	-	-	-	A1
D	D1	D1	-
T	T1	T1
P	P94	P4
Index ERIC	-
Index Emergin	-
Index AHCI	-

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Transposons played a major role in the diversification between the closely related almond and peach genomes: results from the almond genome sequence

Affiliations

Abstract

Quality index